File:PCA of Sweden and Finland.png

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English: Principal component analysis of genetic data of Swedish and Finnish populations. Left: A map of the studied provinces and regions of Sweden and Finland. Full population names and their sample sizes are given in the Table below. Right: Multidimensional scaling plots of genetic distances between individuals. Identity by state (IBS) distances in Northern Europe (a), Sweden and Finland (b), Sweden (c) and Norrland (d), with the legend for panels (b) and (c) in (e). The axis labels show the proportion of variance explained by the axis. In (d), the colouring of individuals represents one of the ten major river valleys of Norrland, from north to south. See also GIF file (File:3D PCA of SWE and FIN.gif) for animated three-dimensional versions of (a) and (b).
Date Published: February 9, 2011
Source Salmela E, Lappalainen T, Liu J, Sistonen P, Andersen PM, Schreiber S, et al. (2011) Swedish Population Substructure Revealed by Genome-Wide Single Nucleotide Polymorphism Data. PLoS ONE 6(2): e16747. doi:10.1371/journal.pone.0016747 http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0016747
Author Elina Salmela, Tuuli Lappalainen, Jianjun Liu, Pertti Sistonen, Peter M. Andersen, Stefan Schreiber, Marja-Liisa Savontaus, Kamila Czene, Päivi Lahermo, Per Hall, Juha Ker
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3D Animation. Click to animate.
Genetic structure
Population IDs
Country region province Abbr. Sample size in Dataset 2 Sample size in Dataset 3
Sweden Sweden 868 1525
Norrland NORR 115 237
Norrbotten NBO NA 73
Västerbotten VBO NA 37
Västerbotten + Norrbotten VNBO 53 NA
Västernorrland VNO 31 75
Jämtland JAM 0 18
Gävleborg GAV 31 34
Svealand SVEA 245 545
Stockholm STO 104 214
Uppsala UPP 26 39
Södermanland SMA 32 43
Värmland VAR NA 95
Dalarna DAL NA 24
Värmland + Dalarna VARD 21 NA
Örebro ORE 42 77
Västmanland VMA 20 26
Götaland GOTA 395 743
Östergötland OGO 42 82
Jönköping JON 35 50
Kalmar + Gotland KAL+GOT 17 55
Kronoberg KRO 30 48
Blekinge BLE 34 50
Skåne SKA 68 114
Malmö MAL 29 29
Halland HAL 38 61
Västra Götaland VGO 74 172
Göteborg (Gothenburg) GOB 28 82
Swedes w/o further information SWEmix 113 0
Finland Finland 280 0
Western Finland FIW 137 0
Southwest Finland SWF 71 0
Satakunta SAT 16 0
Swedish-speaking Ostrobothnia SSOB 20 0
Southern Ostrobothnia SOB 13 0
Häme HAM 17 0
Eastern Finland FIE 124 0
Northern Ostrobothnia NOB 52 0
Kainuu KAI 18 0
Northern Savo SAV 40 0
North Karelia NKAR 14 0
Finns with mixed ancestry MISC 19 0


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current06:25, 11 June 2016Thumbnail for version as of 06:25, 11 June 20168,040 × 4,959 (3.97 MB)Was a bee (talk | contribs){{Information |Description={{en|1=Left: A map of the studied provinces and regions of Sweden and Finland. Full population names and their sample sizes are given in Table below. Right:Multidimensional scaling plots of genetic distances between individ...

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