File:Fcimb-02-00057-g002 (14235743907).jpg

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Source: Front. Cell. Infect. Microbiol., 01 May 2012 | doi:10.3389/fcimb.2012.00057 A framework for assessing the concordance of molecular typing methods and the true strain phylogeny of Campylobacter jejuni and C. coli using draft genome sequence data Catherine D. Carrillo, Peter Kruczkiewicz, Steven Mutschall, Andrei Tudor, Clifford Clark and Eduardo N. Taboada

Figure 2. The core genome phylogeny for C. jejuni and C. coli is consistent with underlying genome-wide SNP rates and accessory genome content. The 104 C. jejuni and C. coli WGS were analyzed using an automated pipeline for core genome analysis; a core gene phylogeny derived from 389 core genes is shown here. This phylogeny was compared to the underlying (A) SNP rates and (B) accessory gene content differences. High SNP rates and accessory genome content differences between C. coli and C. jejuni genomes support a deep split between the species. Conversely, small phylogenetic clusters comprised of highly similar strains are supported by lower differences in SNPs and accessory gene content. A high resolution image of this figure is available in the supplementary material
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Author Phylogeny Figures

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