File:41598 2018 29560 Fig1 HTML.png
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Captions
Captions
Organization of arterivirus genomes.
Summary[edit]
| Description |
English: Organization of arterivirus genomes. Arterivirus open reading frames (ORFs) are drawn to scale. ORFs 1a and 1b can be joined through a −1 programmed ribosomal frameshift to express polyprotein 1a,b. Nonstructural protein 2 transframe fusion product (nsp2TF) is produced through a −2 programmed ribosomal frameshift by most, but not all, arteriviruses. The plot at the bottom of the figure shows the predicted organization of this TF as a transmembrane domain in the case of OSV-1. This plot was made using TMHMM server v2.0 (http://www.cbs.dtu.dk/services/TMHMM/). WPDV, wobbly possum disease virus (GenBank #JN116253); EAV, equine arteritis virus (NC_002532); APRAV-1, African pouched rat virus 1 (NC_026439.1); LaDV-1/2, lactate dehydrogenase-elevating virus 1 and 2 (NC_001639 and L13298.1); PRRSV-1/2, porcine reproductive and respiratory syndrome viruses 1 and 2 (M96262 and NC_001961); RatAV-1, rat arterivirus 1 (NC028963); DeBMV-1, DeBrazza’s monkey virus 1 (NC_026509); DMVV-1; Drakensberg Mountain vervet virus 1 (NC_029992); KKCBV-1, Kafue kinda-chacma baboon virus 1 (NC029053); KRCV-1/2, Kibale red colobus viruses 1 and 2 (HQ845737 and KC787631.1); KRTGV-1/2, Kibale red-tailed guenon viruses 1 and 2 (JX473849 and JX473847); MYBV-1, Mikumi yellow baboon virus 1 (NC_025112.1); PBJV, Pebjah virus (KR139838); SHEV, simian hemorrhagic encephalitis virus (KM677927); SHFV, simian hemorrhagic fever virus (NC_003092); SWBV-1, Southwest baboon virus 1 (NC_025113.1); ZMbV-1, Zambian malbrouck virus 1 (KT166441); OSV-1, Olivier’s shrew virus 1 (MF324848). Four additional murid porarteviruses that have not yet been described are identified by GenBank accession numbers only. |
| Date | |
| Source | Vanmechelen, B., Vergote, V., Laenen, L. et al. Expanding the Arterivirus Host Spectrum: Olivier’s Shrew Virus 1, A Novel Arterivirus Discovered in African Giant Shrews. Sci Rep 8, 11171 (2018). https://doi.org/10.1038/s41598-018-29560-x |
| Author | Bert Vanmechelen, Valentijn Vergote, Lies Laenen, Fara Raymond Koundouno, Joseph Akoi Bore, Jiro Wada, Jens H. Kuhn, Miles W. Carroll, and Piet Maes |
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